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Julien Lopez
QueryR
Commits
829d549f
Commit
829d549f
authored
6 years ago
by
Stefan Anzinger
Committed by
stepan
6 years ago
Browse files
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Update ci.hocon for r-apptests as downstream for fastr.
parent
6a10ad53
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ci.hocon
+2
-266
2 additions, 266 deletions
ci.hocon
ci_common/common.hocon
+199
-0
199 additions, 0 deletions
ci_common/common.hocon
with
201 additions
and
266 deletions
ci.hocon
+
2
−
266
View file @
829d549f
...
...
@@ -3,272 +3,11 @@
# but it provide details on the commands that are used and these should be
# executable in isolation; see further comments below.
# java 7 is needed by Truffle (for now)
java7
:
{
name
:
oraclejdk
,
version
:
"7"
,
platformspecific
:
true
}
# java 8 must be a jvmci enabled variant
java8
:
{
name
:
labsjdk
,
version
:
"8u161-jvmci-0.41"
,
platformspecific
:
true
}
java9
:
{
name
:
labsjdk
,
version
:
"9-ea+168"
,
platformspecific
:
true
}
java8Downloads
:
{
downloads
:
{
EXTRA_JAVA_HOMES
:
{
pathlist
:[
${
java7
}
${
java9
}
]}
JAVA_HOME
:
${
java8
}
}
}
java9Downloads
:
{
downloads
:
{
EXTRA_JAVA_HOMES
:
{
pathlist
:[
${
java7
}
${
java8
}
]}
JAVA_HOME
:
${
java9
}
}
}
logfiles
:
[
"fastr_errors.log"
"results.json"
"libdownloads/R-*/gnur_configure.log"
"libdownloads/R-*/config.log"
"libdownloads/R-*/gnur_make.log"
"libdownloads/R-*/Makeconf"
"com.oracle.truffle.r.native/gnur/tests/log/all.diff"
"com.oracle.truffle.r.test.native/embedded/*.output"
"com.oracle.truffle.r.test.native/embedded/src/*.output"
"*-tests/**/*.Rout"
]
# This is needed by all (Linux) builds but is specific to the module system employed
# on the CI cluster. Not all of the modules are needed by FastR but all are needed by the
# embedded GNU R that is built within FastR.
pkgEnvironment
:
{
environment
:
{
PKG_INCLUDE_FLAGS_OVERRIDE
:
"""-I/cm/shared/apps/zlib/1.2.8/include -I/cm/shared/apps/bzip2/1.0.6/include -I/cm/shared/apps/xz/5.2.2/include -I/cm/shared/apps/pcre/8.38/include -I/cm/shared/apps/curl/7.50.1/include"""
PKG_LDFLAGS_OVERRIDE
:
""""-L/cm/shared/apps/zlib/1.2.8/lib -L/cm/shared/apps/bzip2/1.0.6/lib -L/cm/shared/apps/xz/5.2.2/lib -L/cm/shared/apps/pcre/8.38/lib -L/cm/shared/apps/curl/7.50.1/lib -L/cm/shared/apps/gcc/4.9.1/lib64""""
TZDIR: "/usr/share/zoneinfo"
}
}
packagesLinux :
${
pkgEnvironment
}
{
packages : {
git : ">=1.8.3"
mercurial : ">=2.2"
"pip:astroid" : "==1.1.0"
"pip:pylint" : "==1.1.0"
make : ">=3.83"
gcc-build-essentials : "==4.9.1" # GCC 4.9.0 fails on cluster
readline : "==6.3"
pcre : ">=8.38"
zlib : ">=1.2.8"
curl : ">=7.50.1"
}
}
packagesDarwin : {
"pip:astroid" : "==1.1.0"
"pip:pylint" : "==1.1.0"
"pcre" : "==8.38"
}
# Common settings for all builds but note that it uses the Linux package settings,
# so these must be overridden in any darwin builds
common :
${
java8Downloads
}
${
packagesLinux
}
{
logs: ${logfiles}
timelimit : "1:00:00"
}
# Every "pull request" (PR) is subject to a series of "gate" commands that must pass
# for the PR to be accepted into the master branch. The gate commands are run under
# the "mx" tool. This defines a common prefix for all gate commands. The "-t"
# arg indicates the exact set of gate "tasks" that will be run.
gateCmd : ["mx", "--strict-compliance", "rgate", "-B=--force-deprecation-as-warning", "--strict-mode", "-t"]
# currently disabled gate commands: FindBugs,Checkheaders,Distribution Overlap Check
# The standard set of gate tasks: the actual executable tests are in the "UnitTests" task.
gateTestCommon :
${
common
}
{
run : [
${gateCmd} ["Versions,JDKReleaseInfo,BuildJavaWithJavac,UnitTests: with specials,Rembedded"]
]
}
gateTestLinux :
${
gateTestCommon
}
{
}
gateTestNoSpecialsLinux : ${common} {
run : [
${gateCmd} ["Versions,JDKReleaseInfo,BuildJavaWithJavac,UnitTests: no specials"]
]
}
darwinEnvironment : {
environment : {
PATH : "/usr/local/bin:$JAVA_HOME/bin:$PATH"
F77: "/usr/local/bin/gfortran-4.9"
TZDIR: "/usr/share/zoneinfo"
PKG_INCLUDE_FLAGS_OVERRIDE : """
-I/cm/shared/apps/pcre/
8.38
/
include
-I/cm/shared/apps/bzip
2
/
1.0
.
6
/
include
-I/cm/shared/apps/xz/
5.2
.
2
/
include
-I/cm/shared/apps/c
url
/7.50.1/
include
"""
PKG_LDFLAGS_OVERRIDE : """" -L/cm/shared/apps/bzip2/1.0.6/lib -L/cm/shared/apps/xz/5.2.2/lib -L/cm/shared/apps/pcre/8.38/lib -L/cm/shared/apps/curl/7.50.1/lib -L/cm/shared/apps/gcc/4.9.1/lib64 -L/usr/local/Cellar/gcc@4.9/4.9.4/lib/gcc/4.9/ -L/usr/lib""""
}
}
gateTestDarwin :
${
gateTestCommon
}
${
darwinEnvironment
}
{
packages : ${packagesDarwin}
}
gateTestLinuxNFI : ${gateTestCommon} {
environment : {
FASTR_RFFI : "nfi"
TZDIR: "/usr/share/zoneinfo"
}
}
requireGCC: {
downloads: {
DRAGONEGG_GCC: {name: "gcc+dragonegg", version: "4.6.4-1", platformspecific: true}
DRAGONEGG_LLVM: {name: "clang+llvm", version: "3.2", platformspecific: true}
}
}
gateTestLinuxLLVM :
${
common
}
${
requireGCC
}
{
packages: {
llvm: "==3.8"
}
environment : {
TZDIR: "/usr/share/zoneinfo"
FASTR_RFFI : "llvm"
FASTR_LLVM_TOOLS : "$DRAGONEGG_LLVM/bin"
FASTR_LLVM_GFORTRAN_LLVM_AS : "$DRAGONEGG_LLVM/bin/llvm-as"
FASTR_LLVM_GFORTRAN : "$DRAGONEGG_GCC/bin/gfortran"
FASTR_LLVM_DRAGONEGG : "$DRAGONEGG_GCC/lib/dragonegg.so"
DEFAULT_DYNAMIC_IMPORTS : "sulong"
}
setup: [
["git", "clone", ["mx", "urlrewrite", "https://github.com/graalvm/sulong.git"], "../sulong"],
["mx", "sforceimports"],
["git","clone", "--depth", "1",
${
repoBase
}
"r-apptests.git", "../r-apptests"]
]
run : [
${
gateCmd
}
["Versions,JDKReleaseInfo,BuildJavaWithJavac"]
["mx", "rscript", "../r-apptests/renjin-tests/driver.R", "--setwd", "../r-apptests/renjin-tests/"]
["mx", "pkgtest", "--repos", "FASTR", "--run-tests", "testrffi"]
]
}
gateTestJava9Linux :
${
java9Downloads
}
${
gateTestCommon
}
{
downloads : {
JAVA_HOME : ${java9Downloads.downloads.JAVA_HOME}
EXTRA_JAVA_HOMES : ${java9Downloads.downloads.EXTRA_JAVA_HOMES}
}
}
gateTestDarwinLLVM: ${common} ${darwinEnvironment} ${requireGCC} {
packages : ${packagesDarwin} {
llvm: "==4.0.1"
}
environment : {
FASTR_RFFI : "llvm"
FASTR_LLVM_TOOLS : "$DRAGONEGG_LLVM/bin"
FASTR_LLVM_GFORTRAN_LLVM_AS : "$DRAGONEGG_LLVM/bin/llvm-as"
FASTR_LLVM_GFORTRAN : "$DRAGONEGG_GCC/bin/gfortran"
FASTR_LLVM_DRAGONEGG : "$DRAGONEGG_GCC/lib/dragonegg.so"
DEFAULT_DYNAMIC_IMPORTS : "sulong"
# homebrew doesn't put llvm on the path by default
PATH: "/usr/local/Cellar/llvm@4/4.0.1/bin:$PATH"
LC_MESSAGES: "en_US"
LC_COLLATE: "en_US"
LC_TIME: "en_US"
LC_MONETARY: "en_US"
LC_COLLATE: "en_US.UTF-8"
}
setup: [
["ls", "/usr/local/Cellar"]
["git", "clone", ["mx", "urlrewrite", "https://github.com/graalvm/sulong.git"], "../sulong"],
["mx", "sforceimports"],
["git", "clone", "--depth", "1",
${
repoBase
}
"r-apptests.git", "../r-apptests"]
]
run : [
${
gateCmd
}
["Versions,JDKReleaseInfo,BuildJavaWithJavac"]
["mx", "rscript", "../r-apptests/renjin-tests/driver.R", "--setwd", "../r-apptests/renjin-tests/"]
["mx", "pkgtest", "--repos", "FASTR", "--run-tests", "testrffi"]
]
}
# This performs a number of "style" checks on the code to ensure it confirms to the project standards.
gateStyle :
${
common
}
{
# need pyhocon fix
downloads : {
JAVA_HOME : ${java8Downloads.downloads.JAVA_HOME}
EXTRA_JAVA_HOMES : ${java8Downloads.downloads.EXTRA_JAVA_HOMES}
JDT : {name: ecj, version: "4.5.1", platformspecific: false}
ECLIPSE : {name: eclipse, version: "4.5.2", platformspecific: true}
}
environment : {
ECLIPSE_EXE : "$ECLIPSE/eclipse"
}
run : [
${
gateCmd
}
["Versions,JDKReleaseInfo,Pylint,Canonicalization Check,BuildJavaWithJavac,IDEConfigCheck,CodeFormatCheck,Checkstyle,Copyright check,UnitTests: ExpectedTestOutput file check"]
]
}
gateBuildWithEcj :
${
common
}
{
# need pyhocon fix
downloads : {
JAVA_HOME : ${java8Downloads.downloads.JAVA_HOME}
EXTRA_JAVA_HOMES : ${java8Downloads.downloads.EXTRA_JAVA_HOMES}
JDT : {name: ecj, version: "4.5.1", platformspecific: false}
ECLIPSE : {name: eclipse, version: "4.5.2", platformspecific: true}
}
environment : {
ECLIPSE_EXE : "$ECLIPSE/eclipse"
}
run : [
["mx", "build"]
]
}
# This check runs diagnostics on the implementation of the R "builtins" in FastR, e.g., that the argument processing is sound.
rbcheck :
${
common
}
{
run : [
${gateCmd} ["Versions,JDKReleaseInfo,BuildJavaWithJavac"]
["mx", "rbcheck"]
["mx", "rbdiag"]
]
}
internalPkgtest:
${
common
}
{
run : [
["mx", "build"]
["mx", "pkgtest", "--repos", "FASTR", "--pkg-filelist", "com.oracle.truffle.r.test.native/packages/pkg-filelist"]
]
logs:
${
common.logs
}
}
gnurTests:
${
common
}
{
run : [
["mx", "build"]
["mx", "gnu-rtests"]
]
}
include
"ci_common/common.hocon"
# The standard set of gate builds. N.B. the style/builtin checks are only run on Linux as they are not OS-dependent.
overlay
=
"82b7056d549b998878586415dc111954467c1e44"
builds
=
[
${
gateTestLinux
}
{
capabilities
:
[
linux
,
amd
64
,
fast
],
targets
:
[
gate
],
name
:
"gate-test-linux-amd64"
}
${
gateTestNoSpecialsLinux
}
{
capabilities
:
[
linux
,
amd
64
,
fast
],
targets
:
[
gate
],
name
:
"gate-test-linux-amd64-nospecials"
}
...
...
@@ -279,7 +18,4 @@ builds = [
${
internalPkgtest
}
{
capabilities
:
[
linux
,
amd
64
],
targets
:
[
gate
],
name
:
"gate-internal-pkgtest-linux-amd64"
}
${
gateTestJava9Linux
}
{
capabilities
:
[
linux
,
amd
64
,
fast
],
targets
:
[
gate
],
name
:
"gate-test-java9-linux-amd64"
}
${
gnurTests
}
{
capabilities
:
[
linux
,
amd
64
,
fast
],
targets
:
[
gate
],
name
:
"gate-gnur-tests"
}
# disabled because of spurious dragonegg problems
#
${
gateTestLinuxLLVM
}
{capabilities: [linux, amd64], targets : [gate], name: "gate-test-llvm-linux-amd64" }
#
${
gateTestDarwinLLVM
}
{capabilities: [darwin_sierra, amd64], targets : [gate], name: "gate-test-llvm-darwin-amd64" }
]
This diff is collapsed.
Click to expand it.
ci_common/common.hocon
0 → 100644
+
199
−
0
View file @
829d549f
# java 7 is needed by Truffle (for now)
java7
:
{
name
:
oraclejdk
,
version
:
"7"
,
platformspecific
:
true
}
# java 8 must be a jvmci enabled variant
java8
:
{
name
:
labsjdk
,
version
:
"8u161-jvmci-0.41"
,
platformspecific
:
true
}
java9
:
{
name
:
labsjdk
,
version
:
"9-ea+168"
,
platformspecific
:
true
}
java8Downloads
:
{
downloads
:
{
EXTRA_JAVA_HOMES
:
{
pathlist
:[
${
java7
}
${
java9
}
]}
JAVA_HOME
:
${
java8
}
}
}
java9Downloads
:
{
downloads
:
{
EXTRA_JAVA_HOMES
:
{
pathlist
:[
${
java7
}
${
java8
}
]}
JAVA_HOME
:
${
java9
}
}
}
logfiles
:
[
"fastr_errors.log"
"results.json"
"libdownloads/R-*/gnur_configure.log"
"libdownloads/R-*/config.log"
"libdownloads/R-*/gnur_make.log"
"libdownloads/R-*/Makeconf"
"com.oracle.truffle.r.native/gnur/tests/log/all.diff"
"com.oracle.truffle.r.test.native/embedded/*.output"
"com.oracle.truffle.r.test.native/embedded/src/*.output"
"*-tests/**/*.Rout"
]
# This is needed by all (Linux) builds but is specific to the module system employed
# on the CI cluster. Not all of the modules are needed by FastR but all are needed by the
# embedded GNU R that is built within FastR.
pkgEnvironment
:
{
environment
:
{
PKG_INCLUDE_FLAGS_OVERRIDE
:
"""-I/cm/shared/apps/zlib/1.2.8/include -I/cm/shared/apps/bzip2/1.0.6/include -I/cm/shared/apps/xz/5.2.2/include -I/cm/shared/apps/pcre/8.38/include -I/cm/shared/apps/curl/7.50.1/include"""
PKG_LDFLAGS_OVERRIDE
:
""""-L/cm/shared/apps/zlib/1.2.8/lib -L/cm/shared/apps/bzip2/1.0.6/lib -L/cm/shared/apps/xz/5.2.2/lib -L/cm/shared/apps/pcre/8.38/lib -L/cm/shared/apps/curl/7.50.1/lib -L/cm/shared/apps/gcc/4.9.1/lib64""""
TZDIR: "/usr/share/zoneinfo"
}
}
packagesLinux :
${
pkgEnvironment
}
{
packages : {
git : ">=1.8.3"
mercurial : ">=2.2"
"pip:astroid" : "==1.1.0"
"pip:pylint" : "==1.1.0"
make : ">=3.83"
gcc-build-essentials : "==4.9.1" # GCC 4.9.0 fails on cluster
readline : "==6.3"
pcre : ">=8.38"
zlib : ">=1.2.8"
curl : ">=7.50.1"
}
}
packagesDarwin : {
"pip:astroid" : "==1.1.0"
"pip:pylint" : "==1.1.0"
"pcre" : "==8.38"
}
# Common settings for all builds but note that it uses the Linux package settings,
# so these must be overridden in any darwin builds
common :
${
java8Downloads
}
${
packagesLinux
}
{
logs: ${logfiles}
timelimit : "1:00:00"
}
# Every "pull request" (PR) is subject to a series of "gate" commands that must pass
# for the PR to be accepted into the master branch. The gate commands are run under
# the "mx" tool. This defines a common prefix for all gate commands. The "-t"
# arg indicates the exact set of gate "tasks" that will be run.
gateCmd : ["mx", "--strict-compliance", "rgate", "-B=--force-deprecation-as-warning", "--strict-mode", "-t"]
# currently disabled gate commands: FindBugs,Checkheaders,Distribution Overlap Check
# The standard set of gate tasks: the actual executable tests are in the "UnitTests" task.
gateTestCommon :
${
common
}
{
run : [
${gateCmd} ["Versions,JDKReleaseInfo,BuildJavaWithJavac,UnitTests: with specials,Rembedded"]
]
}
gateTestLinux :
${
gateTestCommon
}
{
}
gateTestNoSpecialsLinux : ${common} {
run : [
${gateCmd} ["Versions,JDKReleaseInfo,BuildJavaWithJavac,UnitTests: no specials"]
]
}
darwinEnvironment : {
environment : {
PATH : "/usr/local/bin:$JAVA_HOME/bin:$PATH"
F77: "/usr/local/bin/gfortran-4.9"
TZDIR: "/usr/share/zoneinfo"
PKG_INCLUDE_FLAGS_OVERRIDE : """
-I/cm/shared/apps/pcre/
8.38
/
include
-I/cm/shared/apps/bzip
2
/
1.0
.
6
/
include
-I/cm/shared/apps/xz/
5.2
.
2
/
include
-I/cm/shared/apps/c
url
/7.50.1/
include
"""
PKG_LDFLAGS_OVERRIDE : """" -L/cm/shared/apps/bzip2/1.0.6/lib -L/cm/shared/apps/xz/5.2.2/lib -L/cm/shared/apps/pcre/8.38/lib -L/cm/shared/apps/curl/7.50.1/lib -L/cm/shared/apps/gcc/4.9.1/lib64 -L/usr/local/Cellar/gcc@4.9/4.9.4/lib/gcc/4.9/ -L/usr/lib""""
}
}
gateTestDarwin :
${
gateTestCommon
}
${
darwinEnvironment
}
{
packages : ${packagesDarwin}
}
gateTestLinuxNFI : ${gateTestCommon} {
environment : {
FASTR_RFFI : "nfi"
TZDIR: "/usr/share/zoneinfo"
}
}
requireGCC: {
downloads: {
DRAGONEGG_GCC: {name: "gcc+dragonegg", version: "4.6.4-1", platformspecific: true}
DRAGONEGG_LLVM: {name: "clang+llvm", version: "3.2", platformspecific: true}
}
}
gateTestJava9Linux :
${
java9Downloads
}
${
gateTestCommon
}
{
downloads : {
JAVA_HOME : ${java9Downloads.downloads.JAVA_HOME}
EXTRA_JAVA_HOMES : ${java9Downloads.downloads.EXTRA_JAVA_HOMES}
}
}
# This performs a number of "style" checks on the code to ensure it confirms to the project standards.
gateStyle :
${
common
}
{
# need pyhocon fix
downloads : {
JAVA_HOME : ${java8Downloads.downloads.JAVA_HOME}
EXTRA_JAVA_HOMES : ${java8Downloads.downloads.EXTRA_JAVA_HOMES}
JDT : {name: ecj, version: "4.5.1", platformspecific: false}
ECLIPSE : {name: eclipse, version: "4.5.2", platformspecific: true}
}
environment : {
ECLIPSE_EXE : "$ECLIPSE/eclipse"
}
run : [
${
gateCmd
}
["Versions,JDKReleaseInfo,Pylint,Canonicalization Check,BuildJavaWithJavac,IDEConfigCheck,CodeFormatCheck,Checkstyle,Copyright check,UnitTests: ExpectedTestOutput file check"]
]
}
gateBuildWithEcj :
${
common
}
{
# need pyhocon fix
downloads : {
JAVA_HOME : ${java8Downloads.downloads.JAVA_HOME}
EXTRA_JAVA_HOMES : ${java8Downloads.downloads.EXTRA_JAVA_HOMES}
JDT : {name: ecj, version: "4.5.1", platformspecific: false}
ECLIPSE : {name: eclipse, version: "4.5.2", platformspecific: true}
}
environment : {
ECLIPSE_EXE : "$ECLIPSE/eclipse"
}
run : [
["mx", "build"]
]
}
# This check runs diagnostics on the implementation of the R "builtins" in FastR, e.g., that the argument processing is sound.
rbcheck :
${
common
}
{
run : [
${gateCmd} ["Versions,JDKReleaseInfo,BuildJavaWithJavac"]
["mx", "rbcheck"]
["mx", "rbdiag"]
]
}
internalPkgtest:
${
common
}
{
run : [
["mx", "build"]
["mx", "pkgtest", "--repos", "FASTR", "--pkg-filelist", "com.oracle.truffle.r.test.native/packages/pkg-filelist"]
]
logs:
${
common.logs
}
}
gnurTests:
${
common
}
{
run : [
["mx", "build"]
["mx", "gnu-rtests"]
]
}
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